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Workflow library - find workflows or redo published studies

Last updated: 16/03/2026

The workflow library is organized as a jupyter book. Clicking the navbar icon on the upper left, you can navigate through the content. It is also possible to search the book for keywords clicking the magnifier icon on the upper right.

The PlantHub workflow library provides R and Python code for data analysis and visualization in the realms of biodiversity, ecology, and earth system sciences. The data used is open-access; however, in some cases, such as TRY, registration with the data providers is necessary. Links to the download pages of the datasets presented on PlantHub can be found in our downloads section. The workflow library is constantly updated and expanded.

If you have questions, suggestions, spot errors, or want to contribute, get in touch with us through planthub@idiv.de.

Contents

Dataset pre-processing

Data cleaning, manipulation, and visualization, and R library cheatsheets

Published studies